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(ENZ
- $51.375 - NYSE)
The Steady Tortoise Whose Sum Is Truly
Greater Than Its Parts
The Role of Genetic Information In Therapy
Modeling & Invention
We
are initiating coverage
of Enzo Biochem, Inc.
(ENZ), a multi-dimensional biotechnology company specializing in diagnostics
services and tools in the life sciences, and developing innovative genetic-based
therapies, with a Strong Buy
rating and a 12-18 month price
target of $111.
Investment
Highlights
·Founded
in 1976 Enzo Biochem, Inc. (ENZ) was one of the first biotechnology companies
to go public (1980). The company is engaged in the research, development,
and manufacture of proprietary and innovative health care products based
on molecular biology and genetic engineering techniques, and provides diagnostic
services to the medical community. Enzo has developed a set of technology
platforms that establish and provide for a range of market opportunities
in:
·
DNA Identification ·
Gene Regulation
·
Immunological Regulation ·
Gene Editing
·The Clinical
Laboratories Division
is generating $30 million in revenues annually, growing at a yearly rate
of 10%.
·The Diagnostics
(Life Sciences) Division
is a growing player in a genomics-focused market that is expected to expand
in tandem with the technology to annual sales in the range of $1-$4
billion.
·The Therapeutics
Division
is developing products for target treatment markets including:
·Hepatitis
B (HBV): $4.2
billion
annually
·HIV
linked AIDS: $18
billion
annually
·Graft
versus Host Disease (GvHD): $2.75
billion
annually
·We anticipate the company can generate EPS of $0.28 in FY2000, $0.51 for FY2001, and $1.69 for FY2002, representing a three-year Compound Growth Rate of 87.14%.
·Our
valuation incorporates a discounted free cash flow method employing a discount
rate of 12%.This rate reflects the
ongoing profitability of the company, its ability to self-finance its research
program, and Enzo’s growing presence in the life sciences arena. We approach
this valuation as a combination of the sum of its component parts and the
continuing expansion of each division’s revenues.This
is a unique company because it is multi-dimensional and has achieved a
very credible presence in each of its market segments. The therapeutic
division represents the prospect of global blockbuster products while the
life sciences units continue to generate ongoing substantial income.


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·The Clinical
Laboratories Division
is generating $30 million in revenues annually, growing at a yearly rate
of 10%.
·The Diagnostics
(Life Sciences) Division
is gaining increasing presence in a genomics-focused market that is expected
to expand in tandem with the technology to annual sales in the range of $1-$4
billion.
·The Therapeutics
Division
is developing products for target treatment markets including:
Hepatitis
B (HBV): (US & 15 member country European Union [EU]) in excess of $4.2
billion
annually
HIV
linked AID: (US alone) in excess of $18
billion
annually
Graft
versus Host Disease (GvHD): (US & EU) in excess of $2.75
billion
annually
·The
company’s proprietary life sciences product line for gene sequencing and
genetic analysis is comprised of more than 400
patents
(issued and pending) worldwide and are sold to the life science market
globally. Enzo continues to expand its relationships supplying biological
‘gene juice’ material to chip makers for incorporation into silicon microchips
(gene/DNA or biochips). The patent estate has been successfully defended
numerous times and remedies applied. In each case Enzo has been the beneficiary
of million dollar cash settlements and, as well, gained labeling agreements
that force the licensee to include the Enzo Biochem, Inc. logo on that
company’s proprietary substance label – hence the development of the ‘ENZO
INSIDE’
identifying mark (see patent estate section).
·Phase
II clinical trials of Enzo’s proprietary medicine EHT899
are underway, following a highly successful Phase I trial for the treatment
of patients with chronic hepatitis B virus
(HBV) thatresulted
in an 80% favorable response rate. October
27-31
- Final Phase I data will be presented at the 51st annual meeting
of the American Association for the Study of Liver Diseases.
·Preliminary
data from Enzo’s Phase I trial of HGTV43,
its proprietary anti HIV-1 antisense gene therapy
product was presented at the annual meeting of the American Society of
Gene Therapy.The results demonstrated
that the engineered cells remained in circulation, were active and remained
present in the individuals’ CD4+ cells at 6 and 8 months.
·October
2, 2000
- The company reported that new data on the first individual treated in
the Phase 1 clinical trial of HGTV-43, the company's HIV-1 gene medicine
product, show that after nine-and-one-half-months Enzo engineered cells
have successfully engrafted in the patient's bone marrow and were spawning
new differentiated CD4+ cells designed to fight the virus.CD4+
cells have been shown to provide resistance to HIV.
Inside ‘ENZO
INSIDE’—20+
years of scientific research, 410 patents issued and pending, extensive
product pipeline, cash flow positive with growing profitability and debt
free, the company is a leader in DNA/gene-based applied medical science.
The
Company
Adenine
Enzo
Biochem, Inc. is comprised of three operational divisions:
·Enzo
Therapeutics
·Enzo
Life Sciences (Diagnostics)
·Enzo
Clinical Labs
Guanosine Guanosine
The
company embarked on its current expanded visionary applied science modality
more than 10 years ago.Leveraging
on its ongoing successful clinical laboratory’s profitable business base,
management undertook to understand the nature of the diseases the presence
of which the laboratory was determining. Long before it became fashionable
Enzo’s investigators understood the gene to be a mine of information and
that products for human use might be developed employing an informational
model of the gene and its expressions. This was quite a visionary undertaking
as at the time the norm consisted in thinking about the cell and its genomic
structure as a medium in which biochemical interactions took place – specifically
recombinant DNA was the dominant technology platform of the day. Management
evolved the belief that gene modification and regulation would offer a
robust modality in the quest for therapies with which to tackle a broad
range of human ailments and diseases.This
approach recognized that the molecules that comprise nucleic acids were
more than storehouses of biologic information and could be employed as
antiviral effectors.In consequence, Enzo’s
Therapeutics Division
strategically embarked on a two-tiered approach.

Thymine
Enzo
researchers focused on the basic structural make-up of the nucleic acids
and have been able to build a library of patents that describe and control
the nature and essence of molecular binding at most of the optimal binding
sites on the four nucleotides that comprise Deoxyribonucleic Acid (DNA):

·
Cytosine
The
enormous advances in molecular biology were once inconceivable without
the use of radioactivity for labeling and detection in nucleic acid analysis.
For many years, it was unequivocally accepted that radiolabeled probes
provided the highest level of sensitivity in detection of single-copy genes
or rare mRNAs. However, there are major drawbacks to the use of isotopes,
including short half-life times (some would no longer exist beyond minutes
or hours), hazards to health and the environment, and extensive safety
regulations for handling, storage, and disposal. The company was successful
in developing alternatives that avoid the drawbacks of radioactivity but
provide equal sensitivity and comparably convenient experimental procedures.

·Enzo’s
global patent web includes separately issued patents that specifically
cover labeling sites on each of the four nucleotides (Thymine, Cytosine,
Adenine, and Guanosine) which comprise DNA and thus the ‘ENZO
INSIDE’ label.
They provide the company with comprehensive and distinctive area coverage
throughout the nucleic acid continuum.Collectively,
Enzo’s patent coverage extends to most labeling and detection positions
on nucleotides for the efficient and convenient labeling of nucleic acids.
This
basic structural work led Enzo scientists to identifying and utilizing
nucleic acids – to deliver methods for regulating the functions of genes.This
gene regulation has been referred to as genetic antisense. This antisense
approach employs the Watson-Crick base pairing principle to permit therapeutic
DNA to target a sensitive viral mRNA or even genomic DNA. Enzo has been
able to use nucleic acids as antiviral agents, designing them to interfere
with processes involving viral messenger RNA—that is to transcribe viral
genes into mRNA or translate viral mRNA into proteins.
Until
recently, the dominant technology in this arena was that of employing oligonucleotides
which are synthetic, the manufacturing process being a large component
of the expense in this costly procedure, administered locally with sustained
dosing where large quantities are needed to affect the desired goals.This
synthetic modality had an additional drawback, the proscribed doses can
be toxic creating another whole problematic dimension to the protocol.
By contrast, Enzo’s genetic modality is a therapy operating at the gene
level. With this modality the insertion of a gene can have a positive effect,
as in enabling the gene to express its natural protein as needed or a negative
end outcome where the problematic gene is inhibited from producing the
problem producing protein.This
last is what is known as antisense. Its two major attributes are that the
therapy is managed/produced by the gene and the impact is permanent. A
further feature of the robust nature of this approach is one of the fundamentals
of nature: that DNA to DNA binding is a constant irrespective of the disease.
Therefore an approach such as Enzo’s, ought to find application to any
disease because the approach focuses on the source of the problem rather
than its expression.
An
extension on the success of this approach by Enzo is the recent approval
and issuance of a US Patent for correcting genetic abnormalities at the
single nucleotide level:
U.S.
Patent No. 5,958,681 claims a method and materials suitable for correcting
point mutations or small insertions or deletions of genetic material. By
way of example, genetic abnormalities caused by single nucleotide alterations
or small deletions could be corrected through the insertion or exchange
of the correct or desired sequences into the genome of the cell where the
error exists.
Normal
Gene Expression
This
new technology provides the company with an additional therapeutic platform
and a uniquely specific approach for treating genetic-based diseases, in
addition to gene therapy and gene modulation. This gene
editing
technique differs from other gene therapies in that other therapies typically
require the complete insertion of an entire new gene to correct a nonfunctional
or incorrectly functional gene.

Antisense Nucleic Acid Inhibits gene Expression
This
invention could lead to creation of a normally functioning gene by correcting
a mutated or altered gene sequence. It could correct, for example, an inborn
error of metabolism for a condition such as hemophilia. Potentially, it
could also be used to correct a mutated p53 gene that controls cell growth.
In the mutated gene, cell growth is uncontrolled, likely resulting in a
cancerous condition. In the corrected p53 gene, cell growth would be restored
to its normal, non-cancerous state. The method and materials covered by
the `681’ patent work by correcting the specific gene within cells by employing
defined short gene sequences through a strategic application.

These
sequences are held in place through formation of a triple
helix
complex. The principle of the invention is that when the short gene sequence
containing the correct sequence is held in general proximity to the target
DNA to be corrected, the probability of a double crossover or an editing
event becomes quite high. That is that the triplex-forming DNA sequences
bind to specific regions in the DNA in a sequence-specific manner so as
to provoke cellular DNA repair. The elegance of this approach is embodied
in that delivering the correct nucleic acid sequence to general proximity
to the incorrect gene sequence inside the cell then stimulates the cell’s
own distinctive DNA repair mechanisms to correct the deleterious condition.
The
company’s therapeutics technologies are finding applications in a number
of directly applicable arenas including the treatment of patients contending
with such conditions as HIV infection, hepatitis, and Graft versus Host
Disease.
Enzo’s
Patent Estate
is substantial with 200 patents approved and another 200 pending. In the
diagnostics realm Enzo’s patents on the binding loci in each of the four
nucleotides as described elsewhere in this report date back to the mid-1980’s.
Enzo has an ongoing evolutionary approach to maintaining this estate as
solid and robust as possible, by evolving new iterations and improvements
to its framework so as to continually expand the patent duration and extension.
There are patent improvements that constitute part of their library of
potential patent developments both on existing patents and on prospective
patents that are being kept in reserve to fit in to the ongoing scientific
business development strategy that the company has forged. The nucleotide
loci patent complex exists in at least 45 patents that cover the territory
of the nucleotide binding sites. The company has defended its intellectual
property in a number of infringement suits and has been successful in every
exercise to date. In 1998 Enzo was granted a decision which netted the
company a settlement of $21 million and an agreement that on every container
label, where applicable, Boehringer
Mannheim,GmbH
is required to place the Enzo logo conspicuously present and equal in size
to the manufacturers’ logo.Agreements
are also in place withRoche
Molecular Diagnostics, Ortho Diagnostics, Dako A/S, Nen Life Sciences,
Inc., and Amersham
International.
Innovation
and development strategy keeps patents vibrant and robust beyond the standard
17.5 years of protection.
Other
patents comprising the bulk of Enzo’s patent estate are similarly protected
and in large part novel expressions of the Enzo scientific and research
estate. Continual innovation permits ongoing support and expansion of initial
patent protection.In any event,
some of the patent estate, as on the continuum gene editing, genetic modification,
and immune modulation is so new and radical that patent life is just commencing.It
is our appreciation that patent protection will extend beyond the terms
of reference for this analytical report and hence is firmly supportive
of our projected revenue model. In the biochip and genetic sequencing area
Enzo has agreements in place with Affymetrix,
Inc., Gene Logic, Inc., and Li-Cor, Inc.
where patent and product protection have been converted to ongoing commercial
relationships.
‘…
detecting the presence of the AIDS virus in blood cells, the presence
of hepatitis virus in serum and the presence of the tuberculosis
organism in sputum.’
Enzo’s
Life Sciences’ (Diagnostics)
business continues to benefit from Enzo’s proprietary nucleic acid binding
site patent web that Enzo enjoys. Leading pharmaceutical manufacturers
and diagnostics labs that wish to attach molecules for labeling or other
applications are required to negotiate with Enzo for the rights to access
these locales on each of the nucleic acids as protected by the issued patents.Gene
probes are emerging as the next growth technology in the diagnostics and
testing market. The advantages that genetic probes bring to the industry
include speed and that the diagnosis is processed in real time. Immunoassays,
the technology that has been the gold standard, suffers from both a degree
of inconsistency of outcome and the fact the process requires time to produce
results.Gene probes, operating
in real time, offer the healthcare community some significant advantages
including: lower cost of use partly because of mechanization, specificity
of treatment, precision, and for public health concerns, this technology
can be distributed widely and easily.
Enzo’sDNA
probe
tests can be powerful diagnostic tools to find and identify viral and bacterial
diseases, including sexually transmitted diseases, as well as cancer. Because
they work at the genetic level, DNA probes have the potential to facilitate
earlier and more definitive diagnoses. This is especially important in
the diagnosis and testing of such problem diseases as AIDS. Antibodies
to HIV, the virus that is causally linked to AIDS, often appear several
months after initial infection. However, Enzo’s test can detect the HIV
virus independent of the presence or absence of antibodies; presence of
the virus can be determined much earlier after infection.
Enzo’sdiagnostics'
market focus is primarily targeted at
infectious disease diagnostics and genetic abnormality detection.
The company has developed an integrated portfolio of proprietary technologies,
each affording a variety of diagnostic applications.
Of
particular importance is the patented technology for DNA that has been
labeled with special non-radioactive
signaling molecules.
This pioneer technology has made possible the development of cohesive systems
based on DNA for early diagnosis. These probes are similar in sensitivity
to radioactive probes, yet have a longer shelf life and possess less health
risk and disposal problems than do the radioactive ones. Enzo's work in
this area has led to commercially viable product capabilities in what were
previously esoteric laboratory tests. Enzo Diagnostics markets a broad
range of products based on this technology.
Enzo's
non-radioactive tests use DNA probes to identify viruses and other infectious
disease pathogens, and cancer markers. The company's PathoGene® product
line contains products which pinpoint under the microscope exactly which
cells are infected and where in the cell the infection is located, making
them especially well-suited for pathologists and cytotechnologists.
A
second generation of nonradioactive DNA-probe based products, includes,
among others, tests for detecting the presence of the AIDS virus in blood
cells, the presence of hepatitis virus in serum and the presence of the
tuberculosis organism in sputum. These tests, performed in a multiwell
or ELISA plate can be readily automated and combine Enzo's proprietary
microplate hybridization technology with the company's nonradioactive DNA
probe technology. At the present these products are sold to the research
community only. Enzo Biochem, Inc. has one of the largest libraries of
disease specific targeted probes in the industry—more than 45 additional
probes are being formatted into an automated diagnostic platform.
This
approach and the resulting products, with the ability to identify microbial
pathogens quickly, has the potential to displace current clinical testing
methods which still use culturing and identification techniques developed
more than a century ago.
Enzo's
diagnostics’ business strategy has been to secure a technology position
enabling the company to fully develop the potential of genetic-based diagnosis.
The success of this approach is evidenced by the diversity and breadth
of the company's patents and pending applications. Enzo has proprietary
technologies for making products in a variety of formats, including solid-matrix
hybridization, in situ products, and those that are solution based or in
suspension. Moreover, a variety of technologies for detection systems has
been devised. Enzo can now create tests that are detectable by visualization,
spectroscopy, radiography, flow cytometry or fluorescence. Many of these
detection systems can be readily automated. With Enzo's pioneering technological
efforts, nonradioactive DNA detection has matured to a state where direct
detection of pathogens in clinical samples can be accomplished in a timely
and cost-effective manner.Enzo Diagnostics’
clinical diagnostic (amplification technologies) product line describes
an annual market potential of $1.1 billion comprised of the following:
·
Non-radioactive
labeling of nucleic acids
· Labeling
systems for nucleic acid arrays
·Membrane
hybridization & detection
·In
situ hybridization & detection systems
·BioProbe®
labeled probes
·Signal
generating systems
·Microplate
hybridization assays
·Immunopathology
reagents
Enzo’s
BioArray Labeling
product line labels, detects, and identifies gene sequences under analysis
by such methods as gene chip and other microarray methods.
EnzoClinical
Labs, Inc.
is a full-service clinical reference laboratory that serves the medical
community through a network of patient service centers. Enzo Clinical Labs
provides innovative high-quality service primarily to physicians as well
as to hospitals, clinics, nursing homes and other clinical laboratories.
The laboratory performs a complete range of clinical procedures from traditional
testing, including routine screening, to advanced esoteric tests, contributing
to the prompt and accurate diagnosis of disease. With 11 patient service
centers the clinical labs division serves the greater New York City area.The
labs division can efficiently process material delivered to its Farmingdale
facility via courier regardless of its point of origin.With
an annual revenue base of $30 million growing at a yearly rate of approximately
11%, the clinical labs division has been generating profits in the order
of $3-$5 million.
Enzo
Biochem, Inc.
with its DNA-gene focused approach to diagnostics and therapeutics is a
dramatic example of the tried and true business model: build a base, generate
surplus, and utilize its core strengths on which expansion is achieved.With
no debt, an historical cash flow positive framework, public since 1980,
and with a management team that has directed its internal growth throughout
its history, the company is poised for a quantum leap onto the highly visible
therapeutic arena.
Significant
Recent Developments
August
7, 2000The
Japanese Patent Office, in an oppositional meeting, upheld Enzo’s patent
No. 2,825,090 that covers a significant component of the company’s gene
identification technology. This intellectual property covers an Enzo invention
that permits direct quantitative measurement of the intensity of any signal
inside a cell and thereby permits measurement of the amount of DNA present
therein.
July
25, 2000Enzo
Biochem, Inc. received notice of allowance for two broad-based patent applications;
one from the U.S. Patent and Trademark Office covering broad applications
in the field of nucleic acid technology and a second from the Canadian
Intellectual Property Office for an Enzo patent for antisense RNA. Issuance
of the Canadian patent is expected later this year and further strengthens
Enzo’s position as a global holder of basic genetic antisense patents,
which have been previously issued in Europe, Japan, and the U.S.These
patents cover compositions and processes for trapping nucleic acid on solid
supports, a process used in the majority of nucleic acid probe tests currently
employed and add to Enzo’s substantial patent estate.
June
15, 2000Results
for third fiscal quarter for 2000 ending April 30, 2000 were reported,
demonstrating a 19%
increasein
net income
to $2,003,000 from $1,682,000 for the quarter in 2000 over the same period
in 1999. Total operating revenues rose to $12,579,000 compared to $12,193,000
for the corresponding period a year earlier. Per share earnings rose to
$0.08 from $0.07 a year earlier, on both a basic and diluted basis. On
a diluted basis average shares outstanding for the period amounted to 26,528,000
and 25,530,000 in the two respective quarters.
For
the nine months ended April 30, 2000 total operating revenues rose to $35,755,000
compared to $33,718,000 for the previous year. Net
income rose 36%
to $5,040,000 from $3,705,000 in the corresponding period a year earlier.
Net income per common share amounted to $0.20 ($0.19 on a fully diluted
basis), as compared to $0.15 (basic and fully diluted) a year ago.
June
14, 2000Enzo
Biochem, Inc. commences Phase II trial of treatment of Chronic Hepatitis
B. The Phase I Trial results showed significant improvement in tested patients
with no adverse effects. Enzo’s proprietary medicine EHT899 for the treatment
of patients with Chronic Hepatitis B (HBV) was employed in the Phase I
trial with an 80% success rate. Fifteen chronic HBV patients were treated
orally with Enzo’s EHT899 viral protein for 20 weeks. Treatment resulted
in a significant reduction in the viral load for the majority of patients
and additionally, demonstrated a measurable improvement with regard to
the damage to the liver stemming from HBV in selected patients.
June
2000As
reported in Gastroenterology Volume 114 Number 4, Enzo’s contribution
to basic research was furthered with the successful transplantation of
human hepatocytes into a RagII mouse liver. This exercise established the
creation of a mouse model which supports human cancerous livers and provides
an animal model for HBV infection and replication, thereby reducing the
transpecies gulf with the potential for reducing time and error in the
drug development process.
June
2, 2000The
company announced preliminary results of Phase I clinical trials of its
anti-HIV-1 antisense gene therapy product, HGTV-43.These
results showed an unprecedented eight-month survival of the engineered
cells in an HIV-infected individual in the group studied and the development
of CD4+ cells expressing the HIV-1 antisense RNA within the cell.Such
antisense cells have previously been shown to provide resistance to the
virus. These results demonstrate that engineered stem cells have replicated
and differentiated within the participants in the trial.
May
22, 2000Positive
results were reported in a paper presented at a conference of leading medical
scientists in San Diego, CA. These results indicated that the wasting response
in humans as well as several forms of debilitating inflammation, among
other side effects afflicting recipients of bone marrow transplantation,
may be significantly alleviated using a new treatment developed by scientists
at Hadassah University Hospital in conjunction with Enzo Biochem, Inc.
Such
side effects are part of graft versus host disease (GvHD), an undesirable
immune response mounted against an individual receiving a bone marrow stem
cell transplant. This disease can occasionally lead to death. There is
currently no effective treatment for chronic GvHD. The paper detailing
the Hadassah/Enzo studies using a mouse model system was presented by Yaron
Ilan, M.D., of Hadassah University Hospital in Jerusalem, at the annual
Digestive Disease Week Conference sponsored by several leading professional
medical organizations. He reported on his collaborative research with scientists
of Enzo Biochem, utilizing Enzo's immune enhancement technology.
This
study demonstrated that oral administration of specific antigens effectively
reversed the manifestations of chronic graft versus host disease. At the
same time, the treated mice were shown to have undergone a favorable change
in blood chemistry promoting a naturally occurring anti-inflammatory and
anti-wasting response.
The
results of this preclinical study demonstrate that Enzo's immune enhancement
regulation technology could be effective in negating the effects of GvHD
by enhancing the anti-inflammatory immune response mounted by the donor
tissue or cells. The paper represented that the treatment was effective
in ameliorating liver, bowel and skin manifestations of GvHD.
On
March 15, 2000 the company announced its receipt of a method and materials
patent for correcting point mutations or small insertions or deletions
of genetic material. This covers an invention (employing
a triple helix)
that could lead to the creation of a normally functioning gene by correcting
a mutated or altered gene sequence, and provides a further therapeutic
platform to Enzo’s portfolio of technologies.
Investment
Thesis
·Enzo
Biochem, Inc. is an established and profitable biotechnology company. With
more than 20 years of scientific research, a strong patent estate of more
than 200 patents issued and another 200 pending, the company has developed
an integrated technology portfolio that serves to support the company’s
exceptional proprietary position. These resources serve also to propel
the company to competitively capitalize on its strategic value. The technology
platforms are at the cutting edge in concert with current market dynamics
and include:
·DNA
Identification
·Gene
Regulation
·Immunological
Regulation
·Gene
Editing
·The
company’s business development and growth has been managed on an internally
driven model. Cash flow positive and debt free, Enzo has grown from a clinical
services and diagnostics company to a leading research and development
company. This internal engine has permitted the requisite growth without
the financial and support crisis which typically plagues many drug research
operations. Additionally management has been consistent in its focus and
deliberately maintained its bearings. Senior management has been with the
company for much of its history. We believe this to be a positive attribute
in that they have demonstrated the capability to drive the operation onto
different arenas while maintaining a focus on their core business.
·The
cash flow positive contribution of the clinical laboratories business,
and more recently diagnostics, continues to grow and further fuel development.
The clinical laboratory services and the diagnostics products divisions
have collectively been generating EBITDA rates of around 20% with a relentless
consistency. Management will not be subject to the vagaries of market success
and the trials and tribulations of dynamic growth. The
target markets
are as follows:
·There
are approximately 53 million HIV infected individuals globally; the vast
majority of these sufferers (more than 90%) live outside the developed
world. For the purposes of our deliberations we have identified the U.S.
market at approximately 950,000 individuals, a like number represented
in the European Union. For our market evaluation purposes we have set the
target market as primarily an U.S. market wherein the anticipated cost
per treatment cycle per year is set at $20,000. We further estimate that
should the World Health Organization entreat the developed world to supply
such treatment to the under-privileged communities, this would have no
effect on the net income of the company. Under such direction, we believe
the effort would be run on a cost recovery basis, yielding only a slight
positive impact resulting from the impact of production economies of scale.
In the event, the expected U.S. market for such treatment is estimated
to be $18 billion.
·
common cause is infection with one of 6 viruses,
called hepatitis A, B, C, D, E, and G. All of these viruses can cause an
acute disease with symptoms lasting several weeks including yellowing of
the skin and eyes (jaundice), dark urine, extreme fatigue, nausea and vomiting,
and abdominal pain. It can take several months to a year to feel fit again.
Some of these viruses can cause a chronic carrier state in which the patient
never gets rid of the virus, and many years later develops cirrhosis of
the liver or liver cancer. Hepatitis B is a virus of this type and the
most serious type of viral hepatitis. It is also the only type causing
chronic disease for which a vaccine is available – but as a prevention
and not as a cure.Hence the continuing
need to find a treatment for chronic HBV sufferers.
The
World Health Organization estimates that approximately 2 billion people
are currently infected by Hepatitis B (HBV). Of these some 350 million
are chronically infected and therefore at risk of death from liver disease
that kills about one million persons each year. Hepatitis B is one of the
major diseases of mankind, and is now preventable with safe and effective
vaccines. Although the vaccine will not cure chronic carriers, it
is 95% effective in preventing the carrier-state from developing. The virus
accounts for 10% of chronic liver disease in the U.S. as well as a major
proportion of liver transplants. Its incidence is believed to be even greater
throughout Europe and the Mediterranean area, and even of greater impact
in underdeveloped countries suffering from poor sanitation and health conditions.
Supporting our evaluation we appreciate that there are approximately six
million sufferers of the chronic form of HBV in the U.S. We do believe,
however, that approval will come more swiftly in the European Union (EU)
countries, partly because of the strategic decision to place the deterministic
trials at the Hadassah Hospital Complex in Israel. We see this as a positive
aspect of the bringing to market of Enzo’s treatment modality of HBV, in
that there is a greater target market within the developed world that is
the EU than there is in the U.S. We target the target market/population
distribution to be: Europe (Western @1%, Central and Eastern, each @6%)
and the Mediterranean region (@7%) as comprising an approximately 5% rate
of chronic sufferers and consequently set the target market to comprise
some 60 million individuals in aggregate. At a full pricing of $70 per
treatment cycle (currently the data supports efficacy out through 20 weeks)
we can establish a theoretical market of $4.2 billion.
·
Enzo
Life Sciences’ (comprised in genomics—gene research and sequencing, and
clinical diagnostics) primary market focus is infectious disease diagnostics
and genetic abnormality detection. The company has developed an integrated
portfolio of proprietary technologies, each affording a variety of diagnostic
applications. Of particular importance is the patented technology for DNA
labeled with special non-radioactive signaling molecules. This pioneer
technology has made possible the development of cohesive systems based
on DNA for early diagnosis. The BioProbe® Systems are similar in sensitivity
to radioactive probes, yet have a longer shelf life and possess less
health risk and disposal problems. Enzo's work in this area has led
to commercially viable product capabilities in what were previously esoteric
laboratory tests. We have assessed Enzo’s BioProbe® technology including
three major categories of product services. This is constituted in Gene
Sequencing comprising a $100 million market; Bacterial ID and Viral load
and molecular genetic Plate Assay in aggregate to constitute a $750 million
market when mature; and Chemiluminescence that would likely comprise a
$300 million mature marketplace. We have assigned market entry and success
timing and rates in our revenue model that has been appended below (page
13).
Management
The management team has been together for much of Enzo’s existence. Unlike many biotechnology companies, this is the team that has brought the company to its current position and potential. They have accomplished this with an unusual aplomb and accompanying strict adherence to the notions of capital management and through internally generated development. This is a tried and true management group that has stood the test of 25 years of business growth.
DR. ELAZAR RABBANI (age 56) has served as Chairman and
a Director of the company (President until 1996) since its organization
in 1976. Dr. Rabbani received his BA degree from New York University in
Chemistry and his Ph.D. degree in Biochemistry from Columbia University.
He is a member of the American Society for Microbiology.
SHAHRAM K. RABBANI (age 48) has served as Chief Operating Officer, Secretary, and Treasurer of the company since November 1996, as Executive Vice President from September 1981 to November 1996 and as Vice President, Treasurer and a Director of the company since its organization. Mr. Rabbani received a BA degree in chemistry from Adelphi University.
BARRY
W. WEINER (age 50) has served as President of the company since November
1996 and as a Director of the company since its organization. Mr. Weiner
has served as an Executive Vice President of the company from September
1981 to November 1996, as a Vice President of the company from the company's
organization to November 1996 and as Secretary of the company from March
1980 to November 1996. He was employed by Colgate-Palmolive Company, New
York, New York from August 1974 until March 1980, when he joined the company
on a full-time basis. Mr. Weiner received his B.S. degree in Economics
from New York University and MBA from Boston University. Mr. Weiner is
a Director of the New York State Biotechnology Association.
DR.
NORMAN E. KELKER (age 61) has been a Vice President of the company since
September 1981. Effective January 1, 1989, he was promoted to Senior Vice
President. From 1975 until he joined the company, Dr. Kelker was an Associate
Professor in the Department of Microbiology of the New York University
School of Medicine. He holds a Ph.D. from Michigan State University.
DR.
DEAN ENGELHARDT (age 60) has been Vice President since September 1981.
Effective January 1, 1989, he was promoted to Senior Vice President. Prior
to joining the company he was Associate Professor of Microbiology at Columbia
University College of Physicians and Surgeons. He obtained his Ph.D. from
Rockefeller University.
HERBERT
B. BASS (age 52) is Vice President of Finance of the company. Prior to
his promotion, Mr. Bass was the Corporate Controller of Enzo. Before joining
Enzo in 1986, Mr. Bass held various positions at Danziger & Friedman,
Certified Public Accountants, from 1979 to 1986, the most recent of which
was audit manager. For the preceding seven years he held various positions
atBerenson & Berenson, C.P.A's.
Mr. Bass holds a Bachelor degree in Business Administration from Baruch
College.
DR.
BARBARA E. THALENFELD (age 60) is Vice President of Corporate Development
and has been with Enzo since 1982. Prior to joining the company she held
a NIH research fellowship at Columbia University. She received a Ph.D.
from Hebrew University-Hadassah Medical Center and a MS from Yale University.
DAVID C. GOLDBERG (age 43) is Vice President
of Business Development. Prior to joining Enzo in 1985, he was employed
at DuPont NEN Products. He received a MS from Rutgers University and an
MBA from New York University.
Risks
and Concerns
As
with all research and development activities that require regulatory approval,
we reiterate that our models projecting revenues and the associated net
estimates of outcomes are predicated on the company successfully negotiating
the regulatory approval processes.Additionally,
it is the nature of this industry that existing and unfolding technologies
and applications of scientific method are continually being superceded
by newly constituted developments, thereby rendering the competing technologies
either redundant or moribund. In essence, there are no guarantees that
any method or technology is or will be successful in this rapidly evolving
and expanding marketplace even if they prove efficacious and utilitarian.
This is a highly competitive environment and best or first does not necessarily
warrant marketplace success.
Outlook
and Valuation
The
near term outlook supports our contention that the company will continue
to generate positive cash flow and EBITDA rates consistent with its historical
past.FDA trials bringing the clinical
efforts on both the HBV and the HIV treatment modalities continue unfolding
with approval target dates 24 months out into the future (final submissions
tentatively set for 2002 for both indications).The
new diagnostic products are expected to achieve market launch in the next
12 months (product releases spread over a wide period and differentially
delivered – see Revenue Model).Our
expectation is that at the very least the Micro Assay and Gene Sequencing
products will have an impact in 2001.For
a full appreciation of the product and market timeline and valuations please
see the Revenue Model in Appendix I.
It
is important to note that our revenue projections are consistent in the
event that FDA approvals for prospective treatment candidates meet the
criteria for approval and are, in fact, approved within the timelines we
have ascribed.Other revenue streams
including royalty/permissions, clinical laboratory services and diagnostic
products are assigned valuations that reflect past practice and historical
data.Needless to say, it is our
contention that we are able to project forward given our assessment of
both the developing marketplace and of management’s expected performance
to meet the needs of the marketplace.
We
have employed a discounted cash flow method to arrive at a current shareholder
valuation. The 3Q2001 projected shareholder valuation that we identify
as our 12-month target is based on extrapolating our discounted cash flow
analysis as follows.We have employed
a 12% discount rate coupled with a 7% terminal growth rate (reflecting
the explosive rate of growth of a new treatment market currently classified
as an unmet medical treatment marketplace), both of which we perceive to
be very modest and conservative as a basis for these projections.The
revenue streams that generated the net incomes on which this valuation
is based also are fully conservative estimates of market size and of the
products’ rate of market proportion gain.To
provide a comparative sense of what Enzo’s current and prospective business
productivity might be we list below a table of what the shareholder value
would be under a range of market success perspectives.In
each case we maintain the same discount rates for our discounted cash flow
model.What we do alter are the market
presence and capture variables.They
are as follows:
Shareholder
Valuation Scenario Table
|
Product
& Market Variables |
Per
Share |
|
Current
Clinical Labs & Diagnostic Products ONLY
|
|
|
+
Prospective Diagnostics including viral loading….
|
|
|
+
HIV treatment USA only
|
|
|
+
HIV USA only + HBV USA only
|
|
|
+
HIV USA only + HBV (EU + USA only)
|
|
|
+
HIV Global + HBV (EU + USA only)
|
|
|
+
HIV Global + HBV Global
|
|
We
have selected the revenue stream we consider most likely to materialize
within our set timelines as described in our revenue model.That
is to say we expect the company to continue to perform strongly along its
clinical laboratory services and diagnostic products lines in keeping with
their historical profile.We expect,
pending FDA and European Medicine Evaluation Agency (EMEA) approvals, the
most likely scenario will have the HIV treatment approved initially in
the USA and the HBV approval gained initially in the EU.In
addition, it our contention that initial market acceptance of these therapeutic
treatment technologies (as outlined in the Shareholder Valuation Scenario
Table above) will be a modest 10% initially and that the market acquisition
growth rate will be in the order of 15% per year for the initial period.
That period extends to the outer limits of our model to the year 2006.
Additionally
we have generated a profile of the company’s Enterprise Value (EV) and
composed an EV/EBITDA ratio (see appended EV/EBITDA valuation sheet).The
EV as estimated for Y2000 matches almost exactly to Enzo’s current market
capitalization.The current EV/EBITDA
ratio is estimated to be a 202 times multiple.By
2006 the company’s EBITDA is expected to grow to approximately 50 times
its 2000 estimated value.These
EV ratios support our free cash flow valuation as to the current shareholder
values and future target ranges as described in the Discounted Cash Flow
method (Appendix II) and is itself portrayed in Appendix V.
Accordingly
we have assigned a target shareholder value for 3Q2001 of $111.
|
APPENDIX
I
Revenue
Stream Estimates (millions)
Enzo
Biochem, Inc.

Appendix
II
Discounted
Cash Flow
Enzo
Biochem, Inc.
(millions
except for per share amounts)

Income
Statement
Enzo
Biochem, Inc.
For
the year ending July 31
(millions
except for per share amounts)

Appendix
IV
Balance
Sheet & CASH Flow Statement
Enzo
Biochem, Inc.
For
the year ending July 31
(millions
except for per share amounts)

Appendix
V
Enzo
Biochem, Inc.
Enterprise
Value Calculations
For
the year ending July 31
(millions
except for per share amounts)

Appendix
A
Gene
Therapy
For
some time the major focus within the realm of diagnosing and correcting
defective or deleterious genes has been based on the concept of gene
addition:
add or introduce corrective genes to cells wherein there are defective
genes.A major impediment to this
approach as with all additive methods lies with the delivery technology
and the volume of material required to bring about the desired effect.For
a positive therapeutic outcome, additive technologies must minimize collateral
influence or damage as well as delivering the additive agent efficiently,
precisely, and able to perform its intended task. Another axiom subtending
this approach is the notion that the newly introduced correct gene would
prove more robust than its defective counterpart and that a consequence
of the introduction exercise would demonstrate success over that of the
defective gene it is meant to replace.Despite
widely publicized trials, extant additive technologies are still in the
proof-of-method state.A more precise
and efficient method might be targeted
gene repair;
that is to correct those defects within the cell by either:
·restricting
or prohibiting the expression of the defective genes (typically by inhibiting
the production of the relevant protein), or
·replacing
the incorrect nucleotides or sequence within the DNA or the mRNA within
the cell so as to effectively change a defective ‘gene’ into a correctly
comprised one.
It
is along these two approach vectors that much elegant work is being done
today.This last is the approach
that Enzo Biochem, Inc. has refined and is exploiting.It
is described below.
Antisense
Nucleic Acids for Therapeutic and Other Applications
The
steady unraveling of the mysteries of life on a molecular level has expanded
drug development options. In the past, drug development relied substantially
on finding natural substances, often by chance, that had a desired effect
and then synthesizing many similar ones and testing their therapeutic efficacy.
Now scientists can use their chemical knowledge of disease pathways to
devise roadblocks to them or ways to bypass them. For example, drugs have
been designed that keep proteins that are key to a disease state from functioning.
Similarly, genetic engineering has made broadly available many functional
human proteins to replace those missing in certain deficiency diseases,
like diabetes or hemophilia, or to augment the supply of certain disease-fighting
proteins when needed, such as tPA during heart attacks or interferon during
pathogen challenge.
While
these therapies take place at the level of protein function, a newer therapeutic
approach targets the pathway to protein formation, called gene expression.
This therapeutic approach involves the use of antisense nucleic acids
and offers a general way to regulate the expression of any gene. An
explanation of what antisense nucleic acids are and what this approach
involves, is aided by a review of gene structure and expression.
Normal
Gene Expression
The
DNA double helix, residing within the nucleus of the cell, contains two
complementary strands of DNA. The magnified view shows how base pairing
between complementary bases holds the strands together.
In
transcription the information encoded in the base sequence in an unwound
section of DNA is incorporated into a complementary RNA transcript (darker
line). This transcript is constructed on the DNA template when complementary
ribonucleotides base pair to the DNA bases. RNA transcripts encoding proteins,
called messenger RNAs (mRNA), are transported through the nuclear membrane
to the cell cytoplasm. In translation the base sequence in the mRNA directs
the incorporation of specific amino acids (dark circles) into proteins.
Protein formation occurs on protein factories called ribosomes.
Hybridization of an antisense nucleic acid (dashed line) with its mRNA complement interferes with protein synthesis

In
gene expression the information encoded in the genes causes the production
of specific proteins. Genetic information is contained within the chemical
structure of DNA, short for deoxyribonucleic acid. The four different building
blocks that comprise DNA are called nucleotides. The hereditary information
is encoded in the linear sequence of nucleotides connected in a DNA strand.
The first step of gene expression is called transcription because
the information in DNA is transcribed into the nucleotide sequence of another
nucleic acid, RNA or ribonucleic acid. In the second step of gene expression,
the information in certain RNA transcripts, called messenger or mRNA, directs
the construction of specific proteins from amino acid building blocks.
This process is called translation because the linear array of nucleotides
in the mRNA is "translated" into a corresponding sequence of amino acids
to form the protein.
Nucleic
acids, then, function in a variety of ways during which the information
they carry is transmitted fairly precisely. In addition to its involvement
in transcription, DNA also participates in exact replication, so that subsequent
generations receive copies of all necessary heredity information. All the
nucleic acid functions -- replication, transcription and translation --
depend upon the specific, reversible bonding that occurs between complementary
nucleic acid strands. This bonding is best exemplified in the structure
of DNA.
DNA
has been dubbed the double helix because its structure consists of two
long complementary nucleic acid strands that are spirally wound around
each other.The four different nucleotides
linked together in DNA differ only in their base components. In a chain
of nucleotides, these bases protrude at regular intervals, like charms
on a bracelet. Each of the four bases can bind to, or pair with, only one
other base, called its complementary base. Complementary strands are ones
in which the array of bases on one strand is exactly matched by an array
of complementary bases on the other. Such strands can form base pairs all
along their length, forming a double helix. This exact pairing process
is called hybridization.
One strand of DNA can serve as a template upon which to construct a complementary
strand. As complementary base pairing lines up nucleotides on the template
strand, adjacent nucleotides can be linked to form a complementary strand.
This is how DNA replication and RNA transcription occur. Base pairing not
only creates faithful DNA replicas and faithful RNA transcripts, it also
has a role in the translation of mRNA into protein. Hybridization between
short segments of mRNA and the unique nucleic acids that carry each amino
acid serves to correctly translate mRNA during protein synthesis.
While DNA is found in the double helix form, RNA transcripts are usually
single stranded. Because the cell ultimately translates an mRNA strand,
it is called the "sense" strand. A nucleic acid strand that is complementary
to, and can hybridize with, at least part of a sense strand is called an
"antisense"' strand. The hybridization of an antisense strand to a sense
mRNA, can interfere with its translation to protein. Hence nucleic acids
that are antisense to the transcript of a specific gene, such as a gene
key to a pathogen or a deleterious human gene like those involved in certain
cancers, could impair the expression of this gene, thereby disabling the
particular disease state.
The
main advantages that an antisense approach to therapy offers are specificity
and point of attack. Antisense targets can be selected that are unique
to the gene whose expression is to be controlled. Hence only that gene's
expression is inhibited. This is especially important for diseases like
viral infections and cancers that employ normal cell functions in the disease
process. It has been difficult to devise therapeutic strategies against
these diseases without also disabling normal cell functioning. Antisense
nucleic acids targeted toward a gene that is diverting these normal cell
functions, however, can specifically impair the disease state without affecting
cell function. An antisense approach, therefore, has fewer side effects
and offers real therapeutic promise for certain cancers and viral diseases.
Another advantage to an antisense approach is that it interferes at the
source of the disease. That is, it interferes with the formation of unwanted
proteins, rather than stopping these proteins from functioning. In addition,
technically it is easier to define nucleic acid targets than it is to define
protein targets. Information about gene structure is being amassed at an
enormous rate, whereas information about protein structure is much harder
to obtain. To illustrate, the genetic sequence of the human genome is expected
to be completely known in fifteen years. It will be considerably longer,
however, before it is understood what all it encodes, and longer still
before the spatial structure of very many of the encoded proteins is known.
Antisense
nucleic acids can be applied in different ways. In one method short segments
of antisense nucleic acids, termed oligonucleotides or "oligos" for short,
can be administered as drugs. Such antisense oligos have been shown in
cell culture to turn off the specific functions encoded by their sense
target. Presumably antisense oligos will need to be administered during
the acute phase of the disease.
In some cases it may be possible to insert a gene that will produce specific
antisense nucleic acids in cells when and where they are required. This
could be used in human therapy if a somatic cell type can be removed, transformed
with an antisense gene, and reimplanted. Such antisense genetic engineering
offers a possible therapeutic strategy for AIDS, caused by infection by
the human immunodeficiency virus (HIV). To illustrate, the bone marrow
of AIDS patients can be removed and transformed with gene producing RNA
transcripts that are antisense to HIV nucleic acids. Bone marrow cells
form the immune system cells that the HIV infects. Hence, when these antisense-HIV
producing bone marrow cells are returned to the body, they could lead to
immune system cells that resist infection by HIV.
Scientists are reporting positive results from their research and animal
testing of genetic antisense for antiviral and cancer applications. Antisense
technology is currently being investigated for the development of therapies
involving HIV infections, glioblastoma, the k-ras oncogene in lung cancer
and a variety of other disease states, as evidenced by the myriad of clinical
studies listed by the National Institutes of Health Recombinant DNA Committee.
In cases where antisense genes can be introduced into the germ line, such
as with plants and animals of agricultural importance, strains can be engineered
that are inherently resistant to specific viruses. In addition, genes that
are antisense to natural genes can be introduced into plants or animals
to modulate the expression of these natural genes, thereby improving such
characteristics as nutritional value, maturation time or aesthetic appeal.
Already antisense genes have been engineered into tomato plants to yield
less bruisable tomatoes and into floral varieties to change the flower
coloration.
Because
an antisense approach is generally applicable to the regulation of any
gene, it has broad commercial potential and can address markets of considerable
magnitude. In addition to its usefulness in therapeutics, it can have a
strong impact on agriculture and the bioprocess industry.
The
extreme specificity of antisense offers real therapeutic promise for cancer
and viral infections, two types of diseases that have consistently eluded
effective treatment, thereby opening up new markets of considerable size.
By the end of the century it is estimated that greater than one million
new cases of cancer will likely be diagnosed in the U.S. and more than
a half million people will die of this disease. Last year greater than
$2 billion was spent on cancer chemotherapeutic products and this market
is growing around 25% per year.
Anti-viral drugs and vaccines are estimated to be about a third of the
approximately $7 billion spent worldwide on anti-infectives last year,
indicating both the difficulty in finding effective anti-viral therapy
and their market potential. For AIDS alone the statistics are staggering.
The Centers for Disease Control estimate that in the United States approximately
950,000 people (1 in 290 persons) are infected with HIV. Current estimates
indicate that, worldwide, as many as 33 million persons may carry this
virus. According to Public Health Service statistics, the cumulative number
of reported AIDS cases is currently greater than 7.7 million and three
quarters of these have been reported since 1993.
The
use of antisense technologies to develop agricultural animals or crops
that are resistant to viruses or other diseases also has considerable commercial
significance. For example, chickens resistant to viral diseases such as
Marek's Disease and Newcastle Disease Virus could strongly impact poultry
production. It has been estimated that the annual cost of Marek's Disease
to the U.S. poultry industry is $160 million due to vaccination costs and
lost meat and egg production. On a worldwide basis this estimated cost
is $940 million. Plant viral diseases are believed to reduce yields 10-20%
across all plant crops. In the U.S. it is estimated that viruses are responsible
for a loss of $1.5 to $2 billion in crop value each year, primarily in
grains. Antisense could also be used to develop plants resistant to those
fungi that require the expression of certain plant genes before they can
successfully invade that plant. This could reduce the $350 million spent
annually in the U.S. on fungicides.
Applications of this technology that alter the nutritional content or shelf
life of foods would also have significant commercial impact. One possibility
is reduced-cholesterol eggs. The value of this commodity in the U.S. has
been estimated at $175 million annually. In plants antisense genetic technology
can also be used to control genes that promote ripening and softening of
fruits and vegetables, thereby providing considerable savings in picking,
transport and storage as well as potentially expanding the seasonal availability
of some fruits and vegetables. Similarly, antisense genetic technology
could conceivably be used to improve the ratio of monosaturated fats to
polyunsaturated fats in plant oils.
With
the advent of genetic engineering the number of commercially important
materials being produced from fermentation and cell culture is increasing
rapidly. In the pharmaceutical area alone, it is anticipated that U.S.
revenues from products obtained by biological processes will total $12
billion by the year 2000. The yields of desired products can be improved
with an antisense genetic strategy that inhibits interfering cellular reactions.
This approach has already doubled the yield of Factor VIII from genetically
engineered mammalian cells. The annual worldwide market for Factor VIII
is estimated at $250 million.
On a worldwide basis products attainable from plant cell culture for use
in medicinals, flavors, fragrances and agricultural chemicals comprise
about a $750 million market. Important medicinal products in this category
include corticosteroids and codeine. It is likely that the yield of these
products can be improved by culturing cells in which antisense genes reduce
competing pathways.
Antisense
Nucleic Acids for Therapeutic and Other Applications
hasbeen
reproduced with the kind permission of Enzo Biochem, Inc. and is protected
under the copyright laws of the United States of America and international
conventions, and is the exclusive property of Enzo Biochem, Inc.All
rights reserved.Enzo Biochem, Inc.
1998.
How
HIV Causes AIDS
Overview
HIV
disease is characterized by a gradual deterioration of immune function.
Most notably, crucial immune cells called CD4+ T cells are disabled and
killed during the typical course of infection. These cells, sometimes called
“T-helper cells,” play a central role in the immune response, signaling
other cells in the immune system to perform their special functions.
A healthy, uninfected person
usually has 800 to 1,200 CD4+ T cells per cubic millimeter (cm) of blood.
During HIV infection, the number of these cells in a person’s blood progressively
declines. When a person’s CD4+ T cell count falls below 200/mm, he or she
becomes particularly vulnerable to the opportunistic infections and cancers
that typify AIDS, the end stage of HIV disease. People with AIDS often
suffer infections of the intestinal tract, lungs, brain, eyes and other
organs, as well as debilitating weight loss, diarrhea, neurologic conditions
and cancers such as Kaposi’s sarcoma and lymphomas.
Most scientists think that HIV
causes AIDS by triggering events that weaken a person’s immune function.
For example, the network of signaling molecules that normally regulates
a person’s immune response is disrupted during HIV disease, impairing a
person’s ability to fight other infections. The HIV-mediated destruction
of the lymph nodes and related immunologic organs also play a major role
in causing the immunosuppression seen in people with AIDS.
Scope
of the HIV Epidemic
Although
HIV was first identified in 1983, studies of previously stored blood samples
indicate that the virus entered the U.S. population sometime in the late
1970s. In the United States, 513,486 cases of people with AIDS had been
reported to the Centers for Disease Control and Prevention (CDC) as of
Dec. 31, 1995. Among these individuals, 319,849 had died by the end of
1995. AIDS is now the leading killer of people aged 25 to 44 in this country.
Worldwide,
an estimated 15 million people had become HIV-infected through mid-1996,
and 7.7 million had developed AIDS, according to the World Health Organization
(WHO). Various projections indicate that, by the year 2000, approximately
950,000 people in the U.S. and 33 million people worldwide will be HIV-infected.
HIV
is a Retrovirus
HIV belongs to a class of viruses
called retroviruses, which have genes composed of ribonucleic acid (RNA)
molecules. The genes of humans and most other organisms are made of a related
molecule, deoxyribonucleic acid (DNA).
Like
all viruses, HIV can replicate only inside cells, commandeering the cell’s
machinery to reproduce. However, only HIV and other retroviruses, once
inside a cell, use an enzyme called reverse transcriptase to convert their
RNA into DNA, which can be incorporated into the host cell’s genes.
Slow
Viruses
HIV belongs to a subgroup of retroviruses known as lentiviruses, or
“slow” viruses. The course of infection with these viruses is characterized
by a long interval between initial infection and the onset of serious symptoms.
Other
lentiviruses infect nonhuman species. For example, the feline immunodeficiency
virus (FIV) infects cats and the simian immunodeficiency virus (SIV) infects
monkeys and other nonhuman primates. Like HIV in humans, these animal viruses
primarily infect immune system cells, often causing immunodeficiency and
AIDS-like symptoms. Scientists use these and other viruses and their animal
hosts as models of HIV disease.
Organization
of the HIV-1 Virion
Structure
of HIV
The
Viral Envelope
HIV
has a diameter of 1/10,000 of a millimeter and is spherical in shape. The
outer coat of the virus, the viral envelope, is composed of two layers
of fatty molecules called lipids, taken from the membrane of a human cell
when a newly formed virus particle buds from the cell.
Embedded
in the viral envelope are proteins from the host cell, as well as 72 copies
(on average) of a complex HIV protein that protrudes from the envelope
surface. This protein, known as Env, consists of a cap made of three or
four molecules called glycoprotein (gp)120, and a stem consisting of three
or four gp41 molecules that anchor the structure in the viral envelope.
Much of the research to develop a vaccine against HIV are focused on these
envelope proteins.
The
Viral Core
Within
the envelope of a mature HIV particle is a bullet-shaped core or capsid,
made of 2000 copies of another viral protein, p24. The capsid surrounds
two single strands of HIV RNA, each of which has a copy of the virus’s
nine genes. Three of these, gag, pol and env, contain information needed
to make structural proteins for new virus particles. The env gene, for
example, codes for a protein called gp160 that is broken down by a viral
enzyme to form gp120 and gp41, the components of env.
Three
regulatory genes, tat, rev and nef, and three auxiliary genes, vif, vpr
and vpu, contain information necessary for the production of proteins that
control the ability of HIV to infect a cell, produce new copies of virus
or cause disease. The protein encoded by nef, for instance, appears necessary
for the virus to replicate efficiently, and the vpu-encoded protein influences
the release of new virus particles from infected cells.
The
ends of each strand of HIV RNA contain an RNA sequence called the long
terminal repeat (LTR). Regions in the LTR act as switches to control production
of new viruses and can be triggered by proteins from either HIV or the
host cell.
The
core of HIV also includes a protein called p7, the HIV nucleocapsid protein;
and three enzymes that carry out later steps in the virus’s life cycle:
reverse transcriptase, integrase and protease. Another HIV protein called
p17, or the HIV matrix protein, lies between the viral core and the viral
envelope.
Life
Cycle of HIV
Steps
in Viral Replication
·Attachment/Entry
·Reverse
Transcription and DNA Synthesis
·Transport
to Nucleus
·Integration
·Viral
Transcription
·Viral
Protein Synthesis
·Assembly
of Virus
·Release
of Virus
·Maturation
Life
Cycle of HIV
Entry
of HIV into Cells
Infection
typically begins when an HIV particle, which contains two copies of the
HIV RNA, encounters a cell with a surface molecule called cluster designation
4 (CD4). Cells with this molecule are known as CD4 positive (CD4+) cells.
One
or more of the virus’s gp120 molecules binds tightly to CD4 molecule(s)
on the cell’s surface. The membranes of the virus and the cell fuse, a
process that probably involves both gp41 and a second “fusion cofactor”
molecule on the cell surface. Recent research by NIAID intramural and extramural
researchers has identified two fusion cofactors for different types of
HIV strains. Following fusion, the virus’s RNA, proteins and enzymes are
released into the cell.
Although
CD4+ T cells appear to be HIV’s main target, other immune system cells
with CD4 molecules on their surfaces are infected as well. Among these
are long-lived cells called monocytes and macrophages, which apparently
can harbor large quantities of the virus without being killed, thus acting
as reservoirs of HIV.
Scientists suspect that HIV also may infect cells without CD4 on their
surfaces, using other docking molecules. For example, cells of the central
nervous system may be infected via a receptor known as galactosyl ceramide.
The role of HIV fusion cofactors in this process is currently under intense
investigation.
Cell-to-cell
spread of HIV also can occur through the CD4-mediated fusion of an infected
cell with an uninfected cell.
Reverse
Transcription
In
the cytoplasm of the cell, HIV reverse transcriptase converts viral RNA
into DNA, the nucleic acid form in which the cell carries its genes. Six
of the nine antiviral drugs approved in the United States for the treatment
of people with HIV infection—AZT, ddC, ddI, d4T, 3TC and nevirapine—work
by interfering with this stage of the viral life cycle.
Integration
The
newly made HIV DNA moves to the cell’s nucleus, where it is spliced into
the host’s DNA with the help of HIV integrase. Once incorporated into the
cell’s genes, HIV DNA is called a “provirus.” Billions of cells in an HIV-infected
person may contain HIV DNA.
Transcription
For
a provirus to produce new viruses, RNA copies must be made that can be
read by the host cell’s protein-making machinery. These copies are called
messenger RNA (mRNA), and production of mRNA is called transcription, a
process that involves the host cell’s own enzymes. Viral genes in concert
with the cellular machinery control this process: the tat gene, for example,
encodes a protein that accelerates transcription.
Cytokines, proteins involved
in the normal regulation of the immune response, also may initiate transcription.
Molecules such as tumor necrosis factor (TNF)-alpha and interleukin (IL)-6,
secreted in elevated levels by the cells of HIV-infected people, may help
to activate HIV proviruses. Other infections, by organisms such as Mycobacterium
tuberculosis, may also initiate transcription.
Translation
After
HIV mRNA is processed in the cell’s nucleus, it is transported to the cytoplasm.
HIV proteins are critical to this process: for example, a protein encoded
by the rev gene allows mRNA encoding HIV structural proteins to be transferred
from the nucleus to the cytoplasm. Without the rev protein, structural
proteins are not made.
In
the cytoplasm, the virus co-opts the cell’s protein-making machinery—including
structures called ribosomes—to make long chains of viral proteins and enzymes,
using HIV mRNA as a template. This process is called translation.
Assembly and Budding
Newly
made HIV core proteins, enzymes and RNA gather just inside the cell’s membrane,
while the viral envelope proteins aggregate within the membrane. An immature
viral particle forms and pinches off from the cell, acquiring an envelope
that includes both cellular and HIV proteins from the cell membrane. During
this part of the viral life cycle, the core of the virus is immature and
the virus is not yet infectious. The long chains of proteins and enzymes
that make up the immature viral core are now cleaved into smaller pieces
by a viral enzyme called protease. This step results in infectious viral
particles.
Drugs
called protease inhibitors interfere with this step of the viral life cycle.
Three such drugs—saquinavir, ritonavir and indinavir—have been approved
for marketing in the United States.
Course
of HIV Infection
Among
patients enrolled in large epidemiologic studies in western countries,
the median time from infection with HIV to the development of AIDS-related
symptoms has been approximately 10 years. However, researchers have observed
a wide variation in disease progression. Approximately 10 percent of HIV-infected
people in these studies have progressed to AIDS within the first two to
three years following infection, while 5 to 10 percent of individuals in
the studies have stable CD4+ T cell counts and no symptoms even after 12
or more years.
Factors such as age or genetic
differences among individuals, the level of virulence of an individual
strain of virus, and co-infection with other microbes may influence the
rate and severity of disease progression.
Viral burden predicts disease progression. Recent studies show that
people with high levels of HIV in their bloodstream are more likely to
develop new AIDS-related symptoms or to die than individuals with lower
levels of virus. New anti-HIV drug combinations that reduce a person’s
“viral burden” to very low levels may delay the progression of HIV disease,
but it remains to be seen if these drugs will have a prolonged benefit.
Other drugs that fight the infections associated with AIDS have improved
and prolonged the lives of HIV-infected people by preventing or treating
conditions such as Pneumocystis carinii pneumonia.
Transmission
of HIV
Among
adults, HIV is spread most commonly via a shared dirty needle by intravenous
drug users (this is a controversial view) and during sexual intercourse
with an infected partner. During sex, the virus can enter the body through
the mucosal linings of the vagina, vulva, penis, rectum or, rarely, through
oral sexual contact. The likelihood of transmission is increased by factors
that may damage these linings, especially other sexually transmitted diseases
that cause ulcers or inflammation.
Research
suggests that immune system cells called dendritic cells, which reside
in the mucosa, may begin the infection process by binding to and carrying
the virus from the site of infection to the lymph nodes where other immune
system cells become infected.
HIV
also can be transmitted by contact with infected blood, most often by the
sharing of drug needles or syringes contaminated with minute quantities
of blood containing the virus. The risk of acquiring HIV from blood transfusions
is now extremely small in the United States, as all blood products in this
country are screened routinely for evidence of the virus.
Almost all HIV-infected children acquire the virus from their mothers
before or during birth. In the United States, approximately 25 percent
of pregnant HIV-infected women not receiving antiretroviral therapy have
passed on the virus to their babies. NIAID-sponsored researchers have shown
that a specific regimen of the drug zidovudine (AZT) can reduce the risk
of transmission of HIV from mother to baby by two-thirds.
The virus also may be transmitted from a nursing HIV-infected mother
to her infant.
Early
Events in HIV Infection
Once
it enters the body, HIV infects a large number of CD4+ cells and replicates
rapidly. During this acute or primary phase of infection, the blood contains
many viral particles that spread throughout the body, seeding various organs,
particularly the lymphoid organs. Lymphoid organs include the lymph nodes,
spleen, tonsils and adenoids and thymus.
During
the acute phase of
infection, the number of CD4+ T cells in the bloodstream
decreases by 20 to 40 percent. Scientists do not yet know whether these
cells are killed by HIV or if they leave the blood and go to the lymphoid
organs in preparation to mount an immune response.
Two
to four weeks after exposure to the virus, up to 70 percent of HIV-infected
persons suffer flu-like symptoms related to the acute infection. The patient’s
immune system fights back with killer T cells (CD8+ T cells) and B-cell-produced
antibodies, which dramatically reduce HIV levels. A patient’s CD4+ T cell
count may rebound to 80 to 90 percent of its original level. A person then
may remain free of HIV-related symptoms for years despite continuous replication
of HIV in the lymphoid organs seeded during the acute phase of infection.
One reason HIV is unique is
that despite the body’s aggressive immune responses, which are sufficient
to clear most viral infections, some HIV invariably escapes. One explanation
is that the immune system’s best soldiers in the fight against HIV—certain
subsets of killer T cells—multiply rapidly following initial HIV infection
and kill many HIV-infected cells, but then appear to exhaust themselves
and disappear, allowing HIV to escape and continue replication. Additionally,
in the few weeks that they are detectable, these specific cells appear
to accumulate in the bloodstream rather than in the lymph nodes, where
most HIV is sequestered – the virus seems to mutate away from the immune
cells.
HIV
is Active in the Lymph Nodes
Although
HIV-infected individuals often exhibit an extended period of clinical latency
with little evidence of disease, the virus is never truly latent. NIAID
researchers have shown that even early in disease, HIV actively replicates
within the lymph nodes and related organs, where large amounts of virus
become trapped in networks of specialized cells with long, tentacle-like
extensions. These cells are called follicular dendritic cells (FDCs).FDCs
are located in hot spots of immune activity called germinal centers. They
act like flypaper, trapping invading pathogens (including HIV) and holding
them until B cells come along to initiate an immune response.
Close on the heels of B cells
are CD4+ T cells, which rush into the germinal centers to help B cells
fight the invaders. CD4+ T cells, the primary targets of HIV, probably
become infected in large numbers as they encounter HIV trapped on FDCs.
Research suggests that some HIV trapped on FDCs remains infectious, even
when cloaked with antibodies.
Once
infected, CD4+ T cells may leave the germinal center and infect other CD4+
cells that congregate in the region of the lymph node surrounding the germinal
center.
Over
a period of years, even when little virus is readily detectable in the
blood, significant amounts of virus accumulate in the germinal centers;
both within infected cells and bound to FDCs. In and around the germinal
centers, numerous CD4+ T cells are probably activated by the increased
production of cytokines such as TNF-alpha and IL-6, possibly secreted by
B cells. Activation allows uninfected cells to be more easily infected
and increases replication of HIV in already infected cells.
While
greater quantities of certain cytokines such as TNF-alpha and IL-6 are
secreted during HIV infection, others with key roles in the regulation
of normal immune function may be secreted in decreased amounts. For example,
CD4+ T cells may lose their capacity to produce interleukin 2 (IL-2), a
cytokine that enhances the growth of other T cells and helps to stimulate
other cells’ response to invaders. Infected cells also have low levels
of receptors for IL-2, which may reduce their ability to respond to signals
from other cells.
Breakdown
of FDC Networks
Ultimately,
accumulated HIV overwhelms the FDC networks. As these networks break down,
their trapping capacity is impaired, and large quantities of virus enter
the bloodstream.
Although it remains unclear why FDCs die and the FDC networks dissolve,
some scientists think that this process may be as important in HIV pathogenesis
as the loss of CD4+ T cells. The destruction of the lymph node structure
seen late in HIV disease may preclude a successful immune response against
not only HIV but other pathogens as well. This devastation heralds the
onset of the opportunistic infections and cancers that characterize AIDS.
Role
of CD8+ T Cells
CD8+
T cells are important in the immune response to HIV during the acute infection
and the clinically latent stage of disease. These cells attack and kill
infected cells that are producing virus.
CD8+ T cells also appear to secrete soluble factors that suppress HIV
replication. Three of these molecules—RANTES, MIP-1alpha and MIP-1beta—apparently
block HIV replication by occupying receptors necessary for the entry of
certain strains of HIV into their target cells. Researchers have hypothesized
that an abundance of RANTES, MIP-1alpha or MIP-1beta, or a relative lack
of receptors for these molecules, may help explain why some individuals
have not become infected with HIV, despite repeated exposure to the virus.CD8+
T cells probably also secrete other soluble factors—as yet unidentified—that
suppress HIV replication.
Rapid
Replication and Mutation of HIV
HIV
replicates rapidly; several billion new virus particles may be produced
every day. In addition, the HIV reverse transcriptase enzyme makes many
mistakes while making DNA copies from HIV RNA. As a consequence, many variants
of HIV develop in an individual, some of which may escape destruction by
antibodies or killer T cells. Additionally, HIV can recombine with itself
to produce a wide range of variants or strains.
During
the course of HIV disease, viral strains emerge in an infected individual
that differ widely in their ability to infect and kill different cell types,
as well as in their rate of replication. Scientists are investigating why
strains of HIV from patients with advanced disease appear to be more virulent
and infect more cell types than strains obtained earlier from the same
individual.
Theories of Immune System Cell Loss in HIV Infection
Researchers
around the world are studying how HIV destroys or disables CD4+ T cells,
and many think that a number of mechanisms may occur simultaneously in
an HIV-infected individual. Recent data suggest that billions of CD4+ T
cells may be destroyed every day, eventually overwhelming the immune system’s
regenerative capacity.
Direct Cell Killing
Infected
CD4+ T cells may be killed directly when large amounts of virus are produced
and bud off from the cell surface, disrupting the cell membrane, or when
viral proteins and nucleic acids collect inside the cell, interfering with
cellular machinery.
Syncytia Formation
Infected
cells also may fuse with nearby uninfected cells, forming balloon-like
giant cells called syncytia. In test-tube experiments at NIAID and elsewhere,
these giant cells have been associated with the death of uninfected cells.
The presence of so-called syncytia-inducing variants of HIV has been correlated
with rapid disease progression in HIV-infected individuals.
Apoptosis
Infected
CD4+ T cells may be killed when cellular regulation is distorted by HIV
proteins, probably leading to their suicide by a process known as programmed
cell death or apoptosis. Recent reports indicate that apoptosis occurs
to a greater extent in HIV-infected individuals, both in the bloodstream
and lymph nodes.
Uninfected cells also may undergo
apoptosis. Normally, when CD4+ T cells mature in the thymus gland, a small
proportion of these cells is unable to distinguish self from non-self.
Because these cells would otherwise attack the body’s own tissues, they
receive a biochemical signal from other cells that results in apoptosis.
Investigators have shown in cell cultures that gp120 alone or bound to
gp120 antibodies sends a similar but inappropriate signal to CD4+ T cells
causing them to die even if not infected by HIV.
Innocent Bystanders
Uninfected
cells may die in an innocent bystander scenario: HIV particles may bind
to the cell surface, giving them the appearance of an infected cell and
marking them for destruction by killer T cells.
Killer T cells also may mistakenly destroy uninfected CD4+ T cells
that have consumed HIV particles and that display HIV fragments on their
surfaces. Alternatively, because HIV envelope proteins bear some resemblance
to certain molecules that may appear on CD4+ T cells, the body’s immune
responses may mistakenly damage such cells as well.
Anergy
Researchers
have shown in cell cultures that CD4+ T cells can be turned off by a signal
from HIV that leaves them unable to respond to further immune stimulation.
This inactivated state is known as anergy.
Superantigens
Other
investigators have proposed that a molecule known as a superantigen, either
made by HIV or an unrelated agent, may stimulate massive quantities of
CD4+ T cells at once, rendering them highly susceptible to HIV infection
and subsequent cell death.
Damage
to Precursor Cells
Studies
suggest that HIV also destroys precursor cells that mature to have special
immune functions, as well as the parts of the bone marrow and the thymus
needed for the development of such cells. These organs probably lose the
ability to regenerate, further compounding the suppression of the immune
system.
Central
Nervous System Damage
Although
HIV can infect monocytes and macrophages, they appear to be relatively
resistant to killing. However, these cells travel throughout the body and
carry HIV to various organs, especially the lungs and brain. People infected
with HIV often experience abnormalities in the central nervous system.
Neurologic manifestations of HIV disease, seen in 40 to 50 percent of HIV-infected
people, are the subject of many research projects. Investigators have hypothesized
that an accumulation of HIV in brain and nerve cells, or the inappropriate
release of cytokines or toxic byproducts by these cells, may be to blame.
Role of Immune Activation in HIV Disease
During
a normal immune response, many components of the immune system are mobilized
to fight an invader. CD4+ T cells, for instance, may quickly proliferate
and increase their cytokine secretion, thereby signaling other cells to
perform their special functions. Scavenger cells called macrophages may
double in size and develop numerous organelles, including lysosomes that
contain digestive enzymes used to process ingested pathogens. Once the
immune system clears the foreign antigen, it returns to a relative state
of quiescence. During HIV infection, however, the immune system may be
chronically activated, with negative consequences. As noted above, HIV
replication and spread are much more efficient in activated CD4+ cells.
Chronic immune system activation during HIV disease may also result in
a massive stimulation of a person’s B cells, impairing the ability of these
cells to make antibodies against other pathogens.
Chronic
immune activation also can result in apoptosis, and an increased production
of cytokines that may not only increase HIV replication but also have other
deleterious effects. Increased levels of TNF-alpha, for example, may be
at least partly responsible for the severe weight loss or wasting syndrome
seen in many HIV-infected individuals.
Immune
activation also seem to extend to the CD4+ T and CD8+ T main cell population
which appears to be depleted systemically under conditions where both these
cell types are killed off as a result. Thus the bank of cells conferring
immune responsiveness is depleted resulting in a population well below
the critical mass required for protection.
The
persistence of HIV and HIV replication probably plays an important role
in the chronic state of immune activation seen in HIV-infected people.
In addition, researchers have shown that infections with other organisms
activate immune system cells and increase production of the virus in HIV-infected
people. Chronic immune activation due to persistent infections, or the
cumulative effects of multiple episodes of immune activation and bursts
of virus production, likely contribute to the progression of HIV disease.
Glossary
Apoptosis:
Cellular suicide, also known as programmed cell death. HIV may induce apoptosis
in both infected and uninfected immune system cells.
B cells: White blood cells of the immune system that
produce infection-fighting proteins called antibodies.
CD4+ T cells: White blood cells that orchestrate the
immune response, signaling other cells in the immune system to perform
their special functions. Also known as T helper cells, these cells are
killed or disabled during HIV infection.
CD8+ T cells: White blood cells that kill cells infected
with HIV or other viruses, or transformed by cancer. These cells also secrete
soluble molecules that may suppress HIV without killing infected cells
directly.
Cytokines: Proteins used for communication by cells of
the immune system. Central to the normal regulation of the immune response.
Cytoplasm: The living matter within a cell.
Dendritic cells: Immune system cells with long, tentacle-like
branches. Some of these are specialized cells at the mucosa that may bind
to HIV following sexual exposure and carry the virus from the site of infection
to the lymph nodes. See also follicular dendritic cells.
Enzyme:
A protein that accelerates a specific chemical reaction without altering
itself.
Follicular dendritic cells (FDCs): Cells found in the
germinal centers (B cell areas) of lymphoid organs. FDCs have thread-like
tentacles that form a web-like network to trap invaders and present them
to B cells, which then make antibodies to attack the invaders.
Germinal centers: Structures within lymphoid tissues
that contain FDCs and B cells, and in which immune responses are initiated.
gp41: Glycoprotein 41, a protein embedded in the outer
envelope of HIV. Plays a key role in HIV’s infection of CD4+ T cells by
facilitating the fusion of the viral and cell membranes.
gp120: Glycoprotein 120, a protein that protrudes from
the surface of HIV and binds to CD4+ T cells.
gp160: Glycoprotein 160, an HIV precursor protein that
is cleaved by the HIV protease enzyme into gp41 and gp120.
Integrase:
An HIV enzyme used by the virus to integrate its genetic material into
the host cell’s DNA.
Kaposi’s
sarcoma:
A type of cancer characterized by abnormal growths of blood vessels that
develop into purplish or brown lesions.
Killer
T cells:
See CD8+ T cells.
Lentivirus:
“Slow” virus characterized by a long interval between infection and the
onset of symptoms. HIV is a lentivirus as is the simian immunodeficiency
virus (SIV), which infects nonhuman primates.
LTR:
Long terminal repeat, the RNA sequences repeated at both ends of HIV’s
genetic material. These regulatory switches may help control viral transcription.
Lymphoid
organs:
Include tonsils, adenoids, lymph nodes, spleen and other tissues. Act as
the body’s filtering system, trapping invaders and presenting them to squadrons
of immune cells that congregate there.
Macrophage:
A large immune system cell that devours invading pathogens and other intruders.
Stimulates other immune system cells by presenting them with small pieces
of the invaders.
Monocyte:
A circulating white blood cell that develops into a macrophage when it
enters tissues.
Nucleotide:
Any member of a class of organic compounds in which the molecular structure
comprises a nitrogen-containing unit (base) linked to a sugar and a phosphate
group. Nucleotides are of great importance to living organisms, as they
are the building blocks of nucleic acids, the substances that control all
hereditary characteristics. In the two families of nucleic acids, ribonucleic
acid (RNA) and deoxyribonucleic acid (DNA), the sequence of nucleotides
in the DNA or RNA codes for the structure of proteins synthesized in the
cell.
Opportunistic
infection:
An illness caused by an organism that usually does not cause disease in
a person with a normal immune system. People with advanced HIV infection
suffer opportunistic infections of the lungs, brain, eyes and other organs.
Pathogenesis:
The production or development of a disease. May be influenced by many factors,
including the infecting microbe and the host’s immune response. Protease:
An HIV enzyme used to cut large HIV proteins into smaller ones needed for
the assembly of an infectious virus particle.
Provirus:
DNA of a virus, such as HIV, that has been integrated into the genes of
a host cell.
Retrovirus:
HIV and other viruses that carry their genetic material in the form of
RNA and that have the enzyme reverse transcriptase.
Reverse
transcriptase:
The enzyme produced by HIV and other retroviruses that allow them to synthesize
DNA from their RNA.
Syncytia:
Giant cells formed by the fusion of other cells.
Sources:National
Institute of Allergy and Infectious Diseases, National Institutes of Health,
Centers for Disease Control, Johns Hopkins Medical School, Adam.com, IntelliHealth.com.
Liver
and Hepatitis Primer
(including
the hepatitis family of contagious viruses
A,B,C,D,E
& G)
Located
in the upper right abdomen, the liver plays two major roles: It neutralizes
toxins and wastes, and it synthesizes new chemicals essential for blood
clotting and other functions. The liver contributes other vital tasks:
it serves as a production facility where important substances, including
most of the proteins in the blood, are made and then exported throughout
the body.Also blood clotting is
regulated from within the liver: the liver makes most of the factors that
clot blood and initiate wound healing. When the liver's function is hampered
by disease, the body's ability to recover from injury is severely impaired.
Features of the liver’s contribution to the body’s health and welfare include:
·Proteins
are processed in the gastrointestinal tract into small peptides and amino
acids, then sent to the liver where they are reconfigured and/or metabolized.
Drugs are absorbed in the stomach and bowel and are converted by the liver
into forms the body can use, or they are broken down and excreted from
the body.
·The
liver stores glycogen, the storage form of glucose, which is readily at
hand when the body needs a quick supply of energy.
·One
of the liver's largest exports is bile, a detergent the liver makes to
dissolve fat in the digestive tract, facilitating absorption. The bile
flows through several channels or bile ducts, into the intestine.
Thus
the liver acts as a massive filter, which detoxifies harmful substances,
including potentially dangerous ingredients in food, and excretes the worst.
Interestingly,
the liver is also the only solid organ in the body able to regenerate itself.If
even as much as 70 percent of its tissue is damaged, by alcohol, drugs
or a virus, such as hepatitis A, B, or C (all of which cause the
liver to become inflamed) the liver manages its own recovery by creating
new replacement cells and tissue.
As
powerful and resilient as the liver is, it is particularly vulnerable to
alcohol, which is a toxin. To the liver, a wine cooler or a can of beer
is poison, although for most people, one drink has no lasting, harmful
effects on the body. However, in combination with medication, or excessive
alcohol intake, the effect can be additive. Over time, the liver will react
and become inflamed and enlarged, a condition called alcoholic hepatitis;
fatty liver, a condition in which globules of fat infiltrate the liver
and harm its ability to function, may also develop. Over time, the liver
can become scarred, labeled as cirrhosis. When too much tissue is destroyed,
the liver can no longer handle the burden of toxins that constantly wash
through it or make its important substances resulting in liver failure.
Liver damage from alcohol or other toxins is often insidious netting negative
results such as cirrhosis in people who have never experienced jaundice
or suffered any other symptoms of liver damage. Although many substances
can damage the liver, the symptoms of liver trouble are often similar.
(E.g., a host of problems can result in jaundice.)These
origination questions thereby require sophisticated diagnostic testing
to determine the particular cause of damage.
Viral
Hepatitis
There are at least six contagious viruses known to cause inflammation of the liver: Hepatitis A, B, C, D, E and G; the first three are the most serious in the United States. (Hepatitis D cannot take hold in the body unless a person is already infected with hepatitis B; thus, if not infected with hepatitis B, one is not at risk for hepatitis D.Hepatitis E, a health problem in East & South Asia, is extremely rare in North America, as is Hepatitis G.) Although their impact on the liver can vary greatly, hepatitis viruses B and C have the potential to develop into chronic hepatitis and to cause permanent liver damage.
Hepatitis
A
Hepatitis
A is responsible for about one-quarter of all cases of viral hepatitis
in the United States. Unlike other forms of hepatitis, hepatitis A is most
commonly transmitted in drinking water or food contaminated with fecal
matter that contains the virus; high concentrations of the virus live in
the feces of an infected person. Like many forms of food poisoning, this
disease could be largely prevented by proper hygiene. Hepatitis A can also
be transmitted by "deep" kissing, by anal sex and by using contaminated
needles to administer intravenous drugs.
This virus is tenacious: at normal room temperature, it can survive for up to four hours in a speck of contaminated fecal material resident on skin, the outside of a diaper or—a common problem in daycare settings—on a hard surface such as a ball, cup or spoon. When contaminated sewage is dumped into fishing waters, shellfish can contract the virus. People who eat the tainted shellfish raw, or even swim in polluted waters, can contract the virus, as well.
Hepatitis A is especially common in the Middle East, South and Central America, Eastern Europe, Africa and Southeast Asia. Each year, the Centers for Disease Control and Prevention estimates some 150,000 Americans are infected with hepatitis A. Because the incubation period is two to six weeks, it is easy for the infection to be spread before any symptoms have developed.
Hepatitis
A virus is seldom life threatening. In most people, it produces temporary
influenza-like symptoms and jaundice, and runs its course. There is no
specific treatment, and typically the body recovers within six months.
The disease hardly ever results in serious complications to pregnant women
or their unborn children. However, in a small percentage of cases, particularly
in the elderly and in people already suffering from such liver problems
as alcoholic hepatitis or cirrhosis, hepatitis A can produce direct or
collateral complications.
Hepatitis
B
Nearly
300,000 Americans contract hepatitis B every year; it is the most common
cause of viral hepatitis. Hepatitis B is spread in infected blood and other
bodily fluids (semen, vaginal secretions, saliva, open sores and breast
milk). Note: It is NOT spread by casual contact; for example, from holding
hands, being exposed to a cough or sneeze, playing with an infected child,
"dry" kissing on the lips, or eating food prepared by someone who has the
virus. An estimated 40 percent of those infected do not know how they acquired
hepatitis B.
Because
the incubation period can be one to six months, it can be difficult to
pinpoint the source of exposure. Like hepatitis A, hepatitis B may be present
in contaminated beaches and raw shellfish.As
many as 10 percent of all people infected with Hepatitis B develop chronic
hepatitis; young children and infants are particularly at risk of becoming
chronically infected or of becoming carriers of the disease.
Most
people manage to fight off the infection successfully within a few months,
developing an immunity that lasts a lifetime. Thus, once cleared of the
virus, the person will never again develop hepatitis B (although they could
still develop another form of hepatitis). Immunity can be checked by a
test called "anti-HBs," for "antibody to hepatitis B surface antigen."
The test registers the presence in the blood of an antibody to the outside
of the hepatitis B virus. If infectious hepatitis B was ever present, antibodies
to the virus will always be present in the blood. Because there is a tiny
risk that the anti-HBs test showed a false positive and that the virus
could still be passed on, the individual will not be allowed to donate
blood, plasma, tissue, body organs or sperm.
An
estimated 1 million Americans are lifelong carriers of hepatitis B. If
infected with hepatitis B for more than six months, then the person is
considered a carrier — even if otherwise healthy and free of symptoms.
This means that the virus can be transmitted to others by having unprotected
sex, sharing needles, deep kissing, sharing food or drinks, or engaging
in any other risky behavior. Because hepatitis B can be a sexually transmitted
disease, it is particularly prevalent in young adults. It also means that
the liver is more vulnerable than normal to injury.
If
a woman is a carrier of hepatitis B and pregnant, there is an estimated
90 percent likelihood of passing on the virus to the unborn baby. Thus,
all pregnant women should be tested for hepatitis B, and if positive, all
their babies should be given immunoglobin and be vaccinated at birth to
protect them from getting the virus. For reasons not understood, the hepatitis
B virus spontaneously goes away in a very small percentage of carriers.
Some people who are carriers develop chronic hepatitis.
According
to the American Liver Foundation, in the United States hepatitis B is responsible
for 5,000 deaths each year—from hepatitis itself, and from other damage
to the liver, including liver cancer, cirrhosis and liver failure (all
of which can be triggered by chronic hepatitis).
Hepatitis
C
About
4 million Americans have hepatitis C; most of these people have never experienced
any symptoms. Few realize they even have this virus, which historically
was identified by what it was not.Until
the late 1980s, it was called "non-A, non-B" hepatitis. A large number
of Americans contracted hepatitis C from blood transfusions until the 1980s,
when new purity tests dramatically lowered the risk of becoming infected
from donated blood.Currently, about
180,000 Americans become infected with this virus each year; and, although
it is usually silent, some scientists believe the annual death rate from
hepatitis C will triple to 25,000 deaths over the next 20 years.
Although
a small percentage of people infected with hepatitis C manage to clear
the virus on their own, the majority develop a chronic infection. Most
of these people have no symptoms and live normal, healthy lives. Less than
one-quarter chronic hepatitis C sufferers eventually develop complications,
including cirrhosis, liver cancer and liver failure. Chronic infection
with hepatitis C is the leading cause for liver transplants.
Hepatitis
C, like hepatitis B, is a blood-borne virus that can be transmitted through
blood transfusions. Since 1990, however, screening tests have dramatically
reduced this risk. It is most commonly spread through infected needles
shared by intravenous drug users and, much less often, through "unprotected"
sex (in which a condom is not used). Most people are diagnosed when a routine
blood test reveals elevated liver enzymes or when a hepatitis C antibody
(anti-HCV) test, given at the time of blood donation, is positive. This
test can remain positive even several years after someone has recovered
from acute hepatitis C — even if the body is no longer infected with the
virus. Currently, there is no vaccine to prevent hepatitis C.
Symptoms
·Jaundice
(yellowing of the skin or whites of eyes and/or a brownish or orange tint
in the urine)
·Unusually
light-colored stool (clay colored)
·Unexplained
fatigue that persists for weeks or even months
·Influenza-like
symptoms, such as fever, loss of appetite, nausea, and vomiting
·Abdominal
pain
Prevention
There
is much that can be done to prevent viral hepatitis. The rules that have
become familiar because of efforts to prevent AIDS apply to hepatitis,
as well: Don't use intravenous drugs or share needles; avoid "unprotected"
sex (without a condom, and make sure to change condoms with each sexual
act). Do not share chewing gum, drinks, razors, toothbrushes or pierced
earrings with anyone (and if any part of the body is pierced or is getting
a tattoo, ensure the needle is properly sterilized). If one must touch
or clean up blood (or items with blood on them, such as tissues or tampons),
wear disposable gloves. To clean an area with blood on it, use bleach (one
part bleach to 10 parts water). To prevent hepatitis A, in addition to
the steps listed above, wash hands frequently, particularly after using
the bathroom or changing a baby's diaper. Also, avoid raw shellfish, which
may be contaminated with hepatitis A or B.
Vaccines
are available for hepatitis A and B. If exposed to the blood or body fluids
of an infected person, a vaccine is needed immediately. Because most forms
of viral hepatitis have an incubation period that lasts several weeks to
months, there is still an opportunity to protect oneself from infection.
To boost the immune system and help the body ward off the virus, an immunoglobulin
shot is required.
Treatment
Treatment
begins with steps to prevent infection, including immediate immunization
if exposed to hepatitis A or B. (There is no vaccine for hepatitis C.)Temporary
immunization is possible with an immune boosting shot called immune serum
globulin (ISE), which should be given within two weeks of exposure to the
virus.Bed rest—as much as possible—is
necessary to speed recovery. Make every effort to eat a high-calorie, high-protein
diet. If experiencing nausea, it can be difficult to get the calories needed
to recover. Try eating as much as possible in the morning, when nausea
tends to be lightest. Also, take extra care of the liver, which is now
vulnerable to further injury. Do not drink alcohol; never mix alcohol with
acetaminophen (found in Tylenol), the combination can harm the liver, and
check with an informed physician before taking any medication. Six months
is the mile marker for hepatitis B or C; if viral hepatitis lasts longer
than this, it is then considered to be chronic hepatitis, and more aggressive
treatment may be needed.
Sources:National
Institute of Allergy and Infectious Diseases, National Institutes of Health,
Centers for Disease Control, Johns Hopkins Medical School, Adam.com, IntelliHealth.com,
The Scientist, Nature, Science.
The
range of applications for biochips is impressively wide and encompasses
both basic science projects and applications directly related to different
areas of human activity. There are many uses to which biochips can be put,
depending on their design. To name only a few:
·DNA
sequence analysis and proofreading
·analysis
of mutations and gene polymorphism
·diagnostics
and monitoring of treatment
·analysis
of gene expression in health, disease and drug treatment
·identification
of microorganisms and viruses
·forensic
studies
Different
applications will require the manufacturing of different chips that may
contain pieces of DNA and RNA, proteins, oligonucleotides or other compounds
of interest.
Types
of Biochips
There
are two general types of biochips: generic chips and customized chips.
Generic chips are designed in a way that is independent of the nature of
the sample to be analyzed, and they can be used for many different purposes.
For example, a generic chip may contain all possible oligonucleotides of
a defined length: 4,096 hexamers, 16,384 heptamers, 65,536 octamers, etc.
The unknown test piece of DNA or RNA is allowed to interact with this array
of immobilized oligonucleotides, and the results of the reaction are monitored.
If the exact position of each oligonucleotide on the chip is known, it
is possible to translate the pattern of reactivity of this given test molecule
into a nucleotide sequence. Thus, such generic chips can be used to read
unknown sequences or proofread sequences obtained by alternative methods.
They can also be used to quickly detect small changes in the genetic makeup
of certain organisms, such as viruses. This capability may eventually be
used in testing vaccines, to make sure that attenuated viruses used as
inducers of the immune response have not mutated into deadly agents.
Bacteria Identification
Customized
microchips are specifically designed for a specific purpose, and contain
selected oligonucleotides or proteins arranged in an easily readable manner.
Thus, for instance, for the purpose of bacterial identification,
microchips
are manufactured that contain certain known stretches of DNA from defined
regions of the bacterial genome. Each chip contains oligonucleotides that
are exactly the same in all living organisms, others that are found in
a smaller group of organisms, and still others that are specific to only
a certain bacterial species. Nucleic acids isolated from the test bacterium
are reacted with such a "microbial" chip. Positive signals will occur only
in certain gel pads and will create a unique pattern of spots. This pattern
will identify the test bacterium in much the same way as fingerprinting
identifies individual human beings.
The
use of the technique could go beyond simple species identification. Nowadays,
genetic engineering manipulations could turn otherwise harmless microbes
into deadly bacteria by introducing certain lethal genes into originally
harmless hosts. In such cases, it is important to have the capability to
detect such genetically transformed bacteria and identify the agent causing
human disease or death. The biochip technology allows us to do this, by
identifying either the introduced foreign gene or, alternatively, its protein
product.
Gene Polymorphism
Customized
chips can be applied to studying gene polymorphism. It is known that certain
genes are slightly different in individual members of the human population
and that this gene polymorphism may be responsible for a number of human
conditions. Thus, relatively small changes in the human leukocyte gene
(HLA) locus have been associated with susceptibility to some disorders
like malaria, multiple sclerosis, allergy, and other autoimmune diseases.
To analyze HLA genes from individuals, a chip was prepared that contained
~70 oligonucleotides of various lengths covering all known polymorphic
positions of the gene. The chip was allowed to interact with human DNA,
and the pattern of interaction analyzed, permitting identification of specific
variants of the gene in specific individuals.
Gene Expression
Customized
chips can also be used to analyze gene expression, either as a part of
a basic research project or in the clinical practice. Although our genome
codes for hundreds of thousands of genes, only a portion of these genes
are actually expressed in any given cell to give specific RNA or protein
products. The portion of the genome being expressed characterizes every
cell type in the human body. This portion is not only cell-type specific
(for example, different sets of genes are expressed in a liver cell and
in a brain cell), but depends on the physiological status of the cell,
on whether the cell is healthy or not, etc. The ability to characterize
the gene expression pattern of a cell is of tremendous importance to our
understanding of how the human body functions and of what changes may occur
during a disease state. The analysis of gene expression can also be used
to monitor changes that occur upon a specific drug treatment or to direct
the choice of effective drugs in each individual case. It can also help
understand inherited and induced drug resistance and help overcome it.
Proteomics
Protein
structure and function can be predicted from the DNA sequence of an organism's
genome, but genomics alone does not provide enough information to understand
how protein function is regulated and the mechanisms that govern when proteins
are actually produced, their relative abundance, and changes in abundance
in response to stimuli. Proteomics is an area of research that seeks to
define the function and
expression
profiles of all proteins encoded within a given genome.
Proteomics
researchers separate, identify, and characterize the proteins expressed
to better understand what their functions are and the regulation of their
functions. Applications of proteomics can be found in numerous fields of
bioscience, including evolution, bioremediation, toxicology, agriculture,
and pharmacology.
Proteomics requires high-throughput methods for separation, quantitation, and identification of hundreds of proteins from biological samples. At Argonne, the primary tool for protein separation and quantitation is two-dimensional gel electrophoresis (2DE). Proteins are identified by using peptide mass spectrometry coupled to genome database searching.
Sources:National
Institute of Allergy and Infectious Diseases, National Institutes of Health,
Centers for Disease Control, Argonne National Laboratory, Livermore Laboratories.
Johns Hopkins Medical School, Adam.com, IntelliHealth.com, The Scientist,
Nature Biotechnology.
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